Package: TreatmentPatterns
Type: Package
Title: Analyzes Real-World Treatment Patterns of a Study Population of
        Interest
Version: 3.1.2
Authors@R: 
    c(person("Aniek", "Markus", , role = c("aut"), comment = c(ORCID = "0000-0001-5779-4794")),
      person("Maarten", "van Kessel", email = "m.l.vankessel@erasmusmc.nl", role = c("cre"), comment = c(ORCID = "0009-0006-8832-6030")))
Maintainer: Maarten van Kessel <m.l.vankessel@erasmusmc.nl>
Description: Computes treatment patterns within a given cohort using
        the Observational Medical Outcomes Partnership (OMOP) common
        data model (CDM). As described in Markus, Verhamme, Kors, and
        Rijnbeek (2022) <doi:10.1016/j.cmpb.2022.107081>.
URL: https://github.com/darwin-eu/TreatmentPatterns,
        https://darwin-eu-dev.github.io/TreatmentPatterns/
BugReports: https://github.com/darwin-eu/TreatmentPatterns/issues
Language: en-US
Depends: R (>= 4.2)
Imports: utils, stats, R6, stringi, jsonlite, checkmate, dplyr, tidyr,
        dbplyr, Andromeda, CDMConnector (>= 2.2.0)
Suggests: knitr, rmarkdown, tibble, testthat (>= 3.0.0), usethis,
        Eunomia, DatabaseConnector (>= 7.0.0), SqlRender,
        CohortGenerator, ResultModelManager, webshot2, CirceR, duckdb,
        DBI, withr, plotly, sunburstR, networkD3, ggplot2, htmlwidgets,
        visOmopResults, PaRe
License: Apache License (>= 2)
Encoding: UTF-8
RoxygenNote: 7.3.3
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/testthat/parallel: true
Roxygen: list(markdown = TRUE)
Collate: 'CDMInterface.R' 'TreatmentPatterns-package.R'
        'TreatmentPatternsResults.R' 'attrition.R' 'computePathways.R'
        'constructPathways.R' 'createSankeyDiagram.R'
        'createSunburstPlot.R' 'executeTreatmentPatterns.R' 'export.R'
        'exportPatientLevel.R' 'getResultsDataModelSpecification.R'
        'ggSunburst.R' 'plotEventDuration.R' 'utils.R'
Config/pak/sysreqs: libicu-dev libssl-dev libx11-dev xz-utils
Repository: https://darwin-eu.r-universe.dev
Date/Publication: 2026-02-11 08:22:48 UTC
RemoteUrl: https://github.com/darwin-eu/treatmentpatterns
RemoteRef: HEAD
RemoteSha: fb4437f21a1f4c4e495dfc5d42cba869bce1b809
NeedsCompilation: no
Packaged: 2026-06-19 14:41:03 UTC; root
Author: Aniek Markus [aut] (ORCID: <https://orcid.org/0000-0001-5779-4794>),
  Maarten van Kessel [cre] (ORCID:
    <https://orcid.org/0009-0006-8832-6030>)