Package: CohortSurvival 1.1.0

Kim López-Güell

CohortSurvival: Estimate Survival from Common Data Model Cohorts

Estimate survival using data mapped to the Observational Medical Outcomes Partnership common data model. Survival can be estimated based on user-defined study cohorts.

Authors:Kim López-Güell [aut, cre], Edward Burn [aut], Martí Català [aut], Xintong Li [aut], Danielle Newby [aut], Nuria Mercade-Besora [aut]

CohortSurvival_1.1.0.tar.gz
CohortSurvival_1.1.0.zip(r-4.7)CohortSurvival_1.1.0.zip(r-4.6)CohortSurvival_1.1.0.zip(r-4.5)
CohortSurvival_1.1.0.tgz(r-4.6-any)CohortSurvival_1.1.0.tgz(r-4.5-any)
CohortSurvival_1.1.0.tar.gz(r-4.7-any)CohortSurvival_1.1.0.tar.gz(r-4.6-any)
CohortSurvival_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
CohortSurvival/json (API)
NEWS

# Install 'CohortSurvival' in R:
install.packages('CohortSurvival', repos = c('https://darwin-eu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/darwin-eu/cohortsurvival/issues

Pkgdown/docs site:https://darwin-eu.github.io

On CRAN:

Conda:

6.61 score 5 stars 68 scripts 671 downloads 20 exports 51 dependencies

Last updated from:6344bc235c. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK354
source / vignettesOK294
linux-release-x86_64OK364
macos-release-arm64OK315
macos-oldrel-arm64OK337
windows-develOK372
windows-releaseOK334
windows-oldrelOK354
wasm-releaseOK138

Exports:addCohortSurvivalasSurvivalResultattritionavailableSurvivalGroupingbindcohortCodelistcohortCountestimateCompetingRiskSurvivalestimateSingleEventSurvivalexportSummarisedResultimportSummarisedResultmockMGUS2cdmoptionsTableSurvivalplotSurvivalriskTablesettingssuppresstableSurvivaltableSurvivalAttritiontableSurvivalEvents

Dependencies:askpassbackportsbitbit64blobbroomCDMConnectorcheckmateclicliprclockcpp11crayoncurlDBIdbplyrdplyrgenericsgluehmshttrjsonlitelatticelifecyclemagrittrMatrixmimeomopgenericsopensslPatientProfilespillarpkgconfigprettyunitsprogresspurrrR6readrrlangsnakecasestringistringrsurvivalsystibbletidyrtidyselecttzdbutf8vctrsvroomwithr

Competing risk survival

Rendered froma02_Competing_risk_survival.Rmdusingknitr::rmarkdownon May 14 2026.

Last update: 2025-12-04
Started: 2023-11-13

Further survival analyses

Rendered froma03_Further_survival_analyses.Rmdusingknitr::rmarkdownon May 14 2026.

Last update: 2025-12-04
Started: 2024-05-07

Single outcome event of interest

Rendered froma01_Single_event_of_interest.Rmdusingknitr::rmarkdownon May 14 2026.

Last update: 2025-12-04
Started: 2023-09-14