Package: DrugUtilisation 0.8.2
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Martí Català
DrugUtilisation: Summarise Patient-Level Drug Utilisation in Data Mapped to the OMOP Common Data Model
Summarise patient-level drug utilisation cohorts using data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. New users and prevalent users cohorts can be generated and their characteristics, indication and drug use summarised.
Authors:
DrugUtilisation_0.8.2.tar.gz
DrugUtilisation_0.8.2.zip(r-4.5)DrugUtilisation_0.8.2.zip(r-4.4)DrugUtilisation_0.8.2.zip(r-4.3)
DrugUtilisation_0.8.2.tgz(r-4.5-any)DrugUtilisation_0.8.2.tgz(r-4.4-any)DrugUtilisation_0.8.2.tgz(r-4.3-any)
DrugUtilisation_0.8.2.tar.gz(r-4.5-noble)DrugUtilisation_0.8.2.tar.gz(r-4.4-noble)
DrugUtilisation_0.8.2.tgz(r-4.4-emscripten)DrugUtilisation_0.8.2.tgz(r-4.3-emscripten)
DrugUtilisation.pdf |DrugUtilisation.html✨
DrugUtilisation/json (API)
NEWS
# Install 'DrugUtilisation' in R: |
install.packages('DrugUtilisation', repos = c('https://darwin-eu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/darwin-eu/drugutilisation/issues
Pkgdown site:https://darwin-eu.github.io
- patternsWithFormula - Patterns valid to compute daily dose with the associated formula.
Last updated 1 months agofrom:4ddf34a0a1. Checks:5 OK, 3 NOTE. Indexed: yes.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Feb 16 2025 |
R-4.5-win | NOTE | Feb 16 2025 |
R-4.5-mac | NOTE | Feb 16 2025 |
R-4.5-linux | NOTE | Feb 16 2025 |
R-4.4-win | OK | Feb 16 2025 |
R-4.4-mac | OK | Feb 16 2025 |
R-4.3-win | OK | Feb 16 2025 |
R-4.3-mac | OK | Feb 16 2025 |
Exports:addCumulativeDoseaddCumulativeQuantityaddDailyDoseaddDaysExposedaddDaysPrescribedaddDrugRestartaddDrugUseaddDrugUtilisationaddExposedTimeaddIndicationaddInitialDailyDoseaddInitialExposureDurationaddInitialQuantityadditionalColumnsaddNumberErasaddNumberExposuresaddRouteaddTimeToExposureaddTreatmentattritionbenchmarkDrugUtilisationbindcohortCodelistcohortCountcohortGapEradailyDoseCoverageerafyCohortexportSummarisedResultgenerateAtcCohortSetgenerateDrugUtilisationCohortSetgenerateIngredientCohortSetgroupColumnsimportSummarisedResultmockDisconnectmockDrugUtilisationpatternTableplotDrugRestartplotDrugUtilisationplotIndicationplotProportionOfPatientsCoveredplotTreatmentreadConceptListrequireDrugInDateRangerequireIsFirstDrugEntryrequireObservationBeforeDrugrequirePriorDrugWashoutsettingssettingsColumnsstrataColumnsstratifyByUnitsummariseDoseCoveragesummariseDrugRestartsummariseDrugUsesummariseDrugUtilisationsummariseIndicationsummariseProportionOfPatientsCoveredsummariseTreatmentsuppresstableDoseCoveragetableDrugRestarttableDrugUtilisationtableIndicationtableProportionOfPatientsCoveredtableTreatmenttidy
Dependencies:backportsbitbit64blobCDMConnectorcheckmateclicliprclockCodelistGeneratorcpp11crayonDBIdbplyrdplyrfansigenericsgluehmsjsonlitelifecyclelubridatemagrittromopgenericsPatientProfilespillarpkgconfigprettyunitsprogresspurrrR6readrRJSONIOrlangsnakecasestringistringrtibbletidyrtidyselecttimechangetzdbutf8vctrsvroomwithr
Getting drug utilisation related information of subjects in a cohort
Rendered fromdrug_utilisation.Rmd
usingknitr::rmarkdown
on Feb 16 2025.Last update: 2024-12-09
Started: 2024-07-17
Creating drug cohorts
Rendered fromcreate_cohorts.Rmd
usingknitr::rmarkdown
on Feb 16 2025.Last update: 2024-07-30
Started: 2024-07-16