Package: visOmopResults 1.5.0

Núria Mercadé-Besora

visOmopResults: Graphs and Tables for OMOP Results

Provides methods to transform omop_result objects into formatted tables and figures, facilitating the visualisation of study results working with the Observational Medical Outcomes Partnership (OMOP) Common Data Model.

Authors:Martí Català [aut], Núria Mercadé-Besora [aut, cre], Yuchen Guo [ctb], Elin Rowlands [ctb], Marta Alcalde-Herraiz [ctb], Edward Burn [ctb]

visOmopResults_1.5.0.tar.gz
visOmopResults_1.5.0.zip(r-4.7)visOmopResults_1.5.0.zip(r-4.6)visOmopResults_1.5.0.zip(r-4.5)
visOmopResults_1.5.0.tgz(r-4.6-any)visOmopResults_1.5.0.tgz(r-4.5-any)
visOmopResults_1.5.0.tar.gz(r-4.7-any)visOmopResults_1.5.0.tar.gz(r-4.6-any)
visOmopResults_1.5.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
visOmopResults/json (API)
NEWS

# Install 'visOmopResults' in R:
install.packages('visOmopResults', repos = c('https://darwin-eu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/darwin-eu/visomopresults/issues

Pkgdown/docs site:https://darwin-eu.github.io

Datasets:
  • data - List of mock results

On CRAN:

Conda:

7.43 score 1 packages 112 scripts 803 downloads 49 exports 30 dependencies

Last updated from:4684ebfa34. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK211
source / vignettesOK303
linux-release-x86_64OK201
macos-release-arm64OK113
macos-oldrel-arm64OK141
windows-develOK144
windows-releaseOK144
windows-oldrelOK144
wasm-releaseOK126

Exports:additionalColumnsaddSettingsalluvialPlotbarPlotbindboxPlotcustomiseTextemptyPlotemptyTableexportSummarisedResultfilterAdditionalfilterGroupfilterSettingsfilterStrataformatEstimateNameformatEstimateValueformatHeaderformatMinCellCountformatTablegroupColumnsimportSummarisedResultmockSummarisedResultpivotEstimatesplotColumnsplotStyleplotTypescatterPlotsetGlobalPlotOptionssetGlobalTableOptionssettingssettingsColumnssplitAdditionalsplitAllsplitGroupsplitStratastrataColumnssuppresstableColumnstableOptionstableStyletableTypethemeVisOmoptidytidyColumnsuniteAdditionaluniteGroupuniteStratavisOmopTablevisTable

Dependencies:base64encblobbrand.ymlclicpp11DBIdbplyrdplyrgenericsgluejsonlitelifecyclemagrittromopgenericspillarpkgconfigpurrrR6rlangsnakecasestringistringrsystemfontstibbletidyrtidyselectutf8vctrswithryaml

Tables

Rendered froma01_tables.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2025-11-07
Started: 2025-01-15

Plots

Rendered froma02_plots.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2026-05-18
Started: 2025-01-15

Quarto reports

Rendered froma03_quarto_reports.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2026-05-18
Started: 2025-10-04

Shiny Apps

Rendered froma04_shiny_apps.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2025-10-13
Started: 2025-10-04

Styles

Rendered froma05_style.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2026-05-18
Started: 2025-11-07

Readme and manuals

Help Manual

Help pageTopics
Create an alluvial plot visualisation from a data frame or a <summarised_result> object.alluvialPlot
Create a bar plot visualisation from a data frame or a <summarised_result> object.barPlot
Create a box plot visualisation from a data frame or a <summarised_result> object.boxPlot
Apply styling to text or column namescustomiseText
List of mock resultsdata
Returns an empty plotemptyPlot
Returns an empty tableemptyTable
Formats estimate_name and estimate_value columnformatEstimateName
Formats the estimate_value columnformatEstimateValue
Create a header for gt and flextable objectsformatHeader
To indicate which was the minimum cell counts where estimates have been suppressed.formatMinCellCount
Creates a flextable or gt object from a dataframeformatTable
A <summarised_result> object filled with mock datamockSummarisedResult
Columns for the plot functionsplotColumns
Pre-defined styles are available for plotsplotStyle
Supported plot typesplotType
Create a scatter plot visualisation from a data frame or a <summarised_result> object.scatterPlot
Set format options for all subsequent plotssetGlobalPlotOptions
Set format options for all subsequent tablessetGlobalTableOptions
Columns for the table functionstableColumns
Additional table formatting options for 'visOmopTable()' and 'visTable()'tableOptions
Pre-defined styles are available for tablestableStyle
Supported table classestableType
Apply a pre-defined visOmopResults theme to a ggplotthemeVisOmop
Generate a formatted table from a <summarised_result>visOmopTable
Generate a formatted table from a <data.table>visTable